2023
Sontag, E. M., Morales-Polanco, F., Chen, J.-H., McDermott, G., Dolan, P.T., Gestaut, D., Le Gros, M.A., Larabell, C., & Frydman, J. (2023) Nuclear and cytoplasmic spatial protein quality control is coordinated by nuclear–vacuolar junctions and perinuclear ESCRT. Nat. Cell Biol. doi:10.1038/s41556-023-01128-6
Eng, T., Banerjee, D., Menasalvas, J., Chen, Y., Gin, j., Choudhary, H., Baidoo, E., Chen, J.-H., Ekman, A., Kakumanu, R., Diercks, Y.L., Codik, A., Larabell, C., Gladden, J., Simmons, B., Keasling, J.D., Petzold, C.J., & Mukhopadhyay, A. (2023) Ensemble and Iterative Engineering for Maximized Bioconversion to the Blue Pigment, Indigoidine from Non-Canonical Sustainable Carbon Sources. bioRxiv 2023.03.16.532821; doi:10.1101/2023.03.16.532821
Boeynaems, S., Ma, X.R., Yeong, V., Ginell, G.M., Chen, J.-H., Blum, J.A., Nakayama, L., Sanyal, A., Briner, A., Van Haver, D., Pauwels, J., Ekman, A., Schmidt, H. B., Sundararajan, K., Porta, L., Lasker, K., Larabell, C., Hayashi, M.A.F., Kundaje, A., Impens, F., Obermeyer, A., Holehouse, A.S., & Gitler, A.D. (2023) Aberrant phase separation is a common killing strategy of positively charged peptides in biology and human disease. bioRxiv 2023.03.09.531820; doi:10.1101/2023.03.09.531820
Ekman, A., Chen, J.-H., Vanslembrouck, B., Loconte, V., Larabell, C., Le Gros, M., & Weinhardt, V. (2023) Extending of imaging volume in soft x-ray tomography. Adv. Photonics Res. 2200142. doi:10.1002/adpr.202200142
Loconte, V., Chen, J.-H., Vanslembrouck, B., Ekman, A.A. McDermott, G., Le Gros, M.A., & Larabell, C.A. (2023) Soft X-ray tomograms provide a structural basis for whole-cell modeling. The FASEB Journal, 37:e22681. doi:10.1096/fj.202200253R
2022
Chen, J.-H., Vanslembrouck, B., Ekman, A., Aho, V., Larabell, C.A., Le Gros, M.A., Vihinen-Ranta, M., & Weinhardt, V. (2022) Soft X-ray Tomography Reveals HSV-1-Induced Remodeling of Human B Cells. Viruses 14, 2651. doi:10.3390/v14122651
Li, A., Zhang, S., Loconte, V., Liu, Y., Ekman, A., Thompson, G.J., Sali, A., Stevens, C.R., White, K., Singla, J., & Sun, L. (2022) An intensity-based post-processing tool for 3D instance segmentation of organelles in soft X-ray tomograms. PLoS ONE 17(9): e0269887. doi:10.1371/journal.pone.0269887
Autin, L., Barbaro, B., Jewett, A., Ekman, A., Verma, S., Olson, A., & Goodsell, D. (2022). Integrative structural modelling and visualisation of a cellular organelle. QRB Discovery, 3, E11. doi:10.1017/qrd.2022.10
Hueschen, C.L., Zarko L.S., Chen, J.H., LeGros, M.A., Larabell, C.A., Boothroyd, J.C., Phillips, & R., Dunn, A.R. (2022). Emergent Actin Flows Explain Diverse Parasite Gliding Modes. bioRxiv, 495399; doi: 10.1101/2022.06.08.49539
Vanslembrouck, B., Chen, J.-H., Larabell, C., & van Hengel, J. (2022). Microscopic Visualization of Cell-Cell Adhesion Complexes at Micro and Nanoscale. Front. Cell Dev. Biol., 10:819534. doi:10.3389/fcell.2022.819534
Li, A., Zhang, X., Singla, J., White, K.L., Loconte, V., Hu, C., Zhang, C., Li, S., Li, W., Francis, J.P., Wang, C., Sali, A., Sun, L., He, X., & Stevens, R. (2022). Auto-segmentation and time-dependent systematic analysis of mesoscale cellular structure in β-cells during insulin secretion. PLoS ONE, 17(3), e0265567. doi:10.1371/journal.pone.0265567
Loconte, V., Singla, J., Li, A., Chen, J.-H., Ekman, A., McDermott, G., Sali, A., Le Gros, M., White, K.L., & Larabell, C. A. (2022). Soft X-ray tomography to map and quantify organelle interactions at the mesoscale. Structure, 30, 1-12. doi:10.1016/j.str.2022.01.006
Chen, J.-H., Vanslembrouck, B., Loconte, V., Ekman, A., Cortese, M., Bartenschlager, R., McDermott, G., Larabell, C.A., Le Gros, M.A., & Weinhardt, V. (2022). A protocol for full-rotation soft X-ray tomography of single cells. STAR Protocols, 3(1), 101176. doi:10.1016/j.xpro.2022.101176
2021
Loconte, V., & White, K. L. (2021). The use of soft X-ray tomography to explore mitochondrial structure and function. Molecular Metabolism, 101421. doi:10.1016/j.molmet.2021.101421
Loconte, V., Chen, J.H., Cortese, M., Ekman, A., Le Gros, M.A., Larabell, C.A., Bartenschlager, R., & Weinhardt, V. (2021). Using soft X-ray tomography for rapid whole-cell quantitative imaging of SARS-CoV-2-infected cells. Cell Reports Methods, 1(7), 100117. doi:10.1016/j.crmeth.2021.100117
Raveh, B., Sun, L., White, K. L., Sanyal, T., Tempkin, J., Zheng, D., Bharat, K., Singla, J., Wang, C.X., Zhao, J., Li, A., Graham, N.A., Kesselman, C., Stevens, R.C., & Sali, A. (2021). Bayesian metamodeling of complex biological systems across varying representations. Proceedings of the National Academy of Sciences, 118(35), e2104559118. doi:10.1073/pnas.2104559118
Levine, Z. H., Garboczi, E. J., Peskin, A. P., Ekman, A. A., Mansfield, E., & Holm, J. D. (2021). X-ray computed tomography using partially coherent Fresnel diffraction with application to an optical fiber. Optics Express, 29(2), 1788-1804. doi:10.1364/OE.414398
2020
White, K. L., Singla, J., Loconte, V., Chen, J. H., Ekman, A., Sun, L., Zhang, X., Francis, J.P., Li, A., Lin, W., Tseng, K., McDermott, G., Alber, F., Sali, A., Larabell, C., & Stevens, R. C. (2020). Visualizing subcellular rearrangements in intact β cells using soft x-ray tomography. Science Advances, 6(50), 1-13. doi:10.1126/sciadv.abc8262
Polo, C. C., Fonseca-Alaniz, M. H., Chen, J. H., Ekman, A., McDermott, G., Meneau, F., Krieger, J.E., & Miyakawa, A. A. (2020). Three-dimensional imaging of mitochondrial cristae complexity using cryo-soft X-ray tomography. Scientific Reports, 10(1), 1-8. doi:10.1038/s41598-020-78150-3
Weinhardt, V., Chen, J. H., Ekman, A. A., Guo, J., Remesh, S. G., Hammel, M., McDermott, G., Chao, W., Oh, S., Le Gros, M.A., & Larabell, C. A. (2020). Switchable resolution in soft x-ray tomography of single cells. PLoS ONE, 15(1), 1-14. doi:10.1371/journal.pone.0227601
Remesh, S. G., Verma, S. C., Chen, J. H., Ekman, A. A., Larabell, C. A., Adhya, S., & Hammel, M. (2020). Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling. Nature Communications, 11(1), 1-12. doi:10.1038/s41467-020-16724-5
Ma, J., Do, M., Le Gros, M. A., Peskin, C. S., Larabell, C. A., Mori, Y., & Isaacson, S. A. (2020). Strong intracellular signal inactivation produces sharper and more robust signaling from cell membrane to nucleus. PLoS Computational Biology, 16(11), 1-19. doi:10.1371/journal.pcbi.1008356
2019
Guo, J., & Larabell, C. A. (2019). Soft X-ray tomography: virtual sculptures from cell cultures. Current Opinion in Structural Biology, 58, 324-332. doi:10.1016/j.sbi.2019.06.012
Weinhardt, V., Chen, J. H., Ekman, A., McDermott, G., Le Gros, M. A., & Larabell, C. (2019). Imaging cell morphology and physiology using X-rays. Biochemical Society Transactions, 47, 489-508. doi:10.1042/BST20180036
Walters, A. D., Amoateng, K., Wang, R., Chen, J.-H., McDermott, G., Larabell, C. A., Gadal, O., & Cohen-Fix, O. (2018). Nuclear envelope expansion in budding yeast is independent of cell growth and does not determine nuclear volume. Molecular Biology of the Cell, 30(1), 131-145. doi:10.1091/mbc.E18-04-0204
Roth, M. S., Gallaher, S. D., Westcott, D. J., Iwai, M., Louie, K. B., Mueller, M., Walter, A., Foflonker, F., Bowen, B.P., Ataii, N.N., Song, J., Chen, J.H., Blaby-Haas, C.E., Larabell, C., Auer, M., Northen, T.R., Merchant, S.S., & Niyogi, K. K. (2019). Regulation of oxygenic photosynthesis during trophic transitions in the green alga Chromochloris Zofingiensis. Plant Cell, 31(3), 579-601. doi:10.1105/tpc.18.00742
Boeynaems, S., Holehouse, A. S., Weinhardt, V., Kovacs, D., Van Lindt, J., Larabell, C., Van Den Bosch, L., Das, R., Tompa, P.S., Pappu, R.V., & Gitler, A. D. (2019). Spontaneous driving forces give rise to protein−RNA condensates with coexisting phases and complex material properties. Proceedings of the National Academy of Sciences, 116(16), 7889. doi:10.1073/pnas.1821038116
Aho, V., Mäntylä, E., Ekman, A., Hakanen, S., Mattola, S., Chen, J.-H., Weinhardt, V., Ruokolainen, V., Sodeik, B., Larabell, C., & Vihinen-Ranta, M. (2019). Quantitative Microscopy Reveals Stepwise Alteration of Chromatin Structure during Herpesvirus Infection. Viruses, 11(10). doi:10.3390/v11100935
2018
Smallwood, C. R., Chrisler, W., Chen, J.-H., Patello, E., Thomas, M., Boudreau, R., Ekman, A., Wang, H., McDermott, G., & Evans, J. E. (2018). Ostreococcus tauri is a high-lipid content green algae that extrudes clustered lipid droplets. bioRxiv, 249052. doi:10.1101/249052
Smallwood, C. R., Chen, J.-H., Kumar, N., Chrisler, W., Purvine, S. O., Kyle, J. E., Nicora, C.D., Boudreau, R., Ekman, A., Hixson, K.K., Moore, R.J., McDermott, G., Cannon, W.R., & Evans, J. E. (2018). Integrated systems biology and imaging of the smallest free-living eukaryote Ostreococcus tauri. bioRxiv, 293704. doi:10.1101/293704
Pelt, D. M., & Sethian, J. A. (2018). A mixed-scale dense convolutional neural network for image analysis. Proceedings of the National Academy of Sciences, 115(2), 254. doi:10.1073/pnas.1715832114
Mehta, A. P., Supekova, L., Chen, J.-H., Pestonjamasp, K., Webster, P., Ko, Y., Henderson, S.C., McDermott, G., Supek, F., & Schultz, P. G. (2018). Engineering yeast endosymbionts as a step toward the evolution of mitochondria. Proceedings of the National Academy of Sciences, 115(46), 11796. doi:10.1073/pnas.1813143115
Ekman, A., Weinhardt, V., Chen, J. H., McDermott, G., Le Gros, M. A., & Larabell, C. (2018). PSF correction in soft X-ray tomography. Journal of Structural Biology, 204(1), 9-18. doi:10.1016/j.jsb.2018.06.003
2017
Dekker, J., Belmont, A. S., Guttman, M., Leshyk, V. O., Lis, J. T., Lomvardas, S., Mirny, L.A., O’Shea, C.C., Park, P.J., Ren, B., Ritland Politz, J.C., Shendure, J., Zhong, S., & the 4D Nucleome Network. (2017). The 4D nucleome project. Nature, 549(7671), 219-226. doi:10.1038/nature23884
Roth, M. S., Cokus, S. J., Gallaher, S. D., Walter, A., Lopez, D., Erickson, E., Endelman, B., Westcott, D., Larabell, C.A., Merchant, S.S., Pellegrini, M., & Niyogi, K. K. (2017). Chromosome-level genome assembly and transcriptome of the green alga Chromochloris zofingiensis illuminates astaxanthin production. Proceedings of the National Academy of Sciences, 114(21), E4296. doi:10.1073/pnas.1619928114
Chongsiriwatana, N. P., Lin, J. S., Kapoor, R., Wetzler, M., Rea, J. A. C., Didwania, M. K., Contag, C.H., & Barron, A. E. (2017). Intracellular biomass flocculation as a key mechanism of rapid bacterial killing by cationic, amphipathic antimicrobial peptides and peptoids. Scientific Reports, 7(1), 16718. doi:10.1038/s41598-017-16180-0
Ekman, A. A., Chen, J. H., Guo, J., McDermott, G., Le Gros, M. A., & Larabell, C. A. (2017). Mesoscale imaging with cryo-light and X-rays: Larger than molecular machines, smaller than a cell. Biology of the Cell, 109(1), 24-38. doi:10.1111/boc.201600044
Aho, V., Myllys, M., Ruokolainen, V., Hakanen, S., Mantyla, E., Virtanen, J., Hukkanen, V., Kuhn, T., Timonen, J., Mattila, K., Larabell, C.A. & Vihinen-Ranta, M. (2017). Chromatin organization regulates viral egress dynamics. Scientific Reports, 7, doi:10.1038/s41598-017-03630-y
Seo, A. Y., Lau, P.-W., Feliciano, D., Sengupta, P., Gros, M. A. L., Cinquin, B., Larabell, C.A., & Lippincott-Schwartz, J. (2017). AMPK and vacuole-associated Atg14p orchestrate μ-lipophagy for energy production and long-term survival under glucose starvation. eLife, 6, e21690. doi:10.7554/eLife.21690
2016
LeGros, M. A., Clowney, E. J., Magklara, A., Yen, A., Markenscoff-Papadimitriou, E., Colquitt, B., Myllys, M., Kellis, M., Lomvardas, S., & Larabell, C. A. (2016). Soft x-ray tomography reveals gradual chromatin compaction and reorganization during neurogenesis in vivo. Cell Report, 17(8), 2125-2136. doi:10.1016/j.celrep.2016.10.060
LeGros, M. A., Chen, J.-H., Do, M., McDermott, G., & Larabell, C. A. (2016). Putting Molecules in the Picture: Using Correlated Light Microscopy and Soft X-Ray Tomography to Study Cells. Synchrotron Light Sources and Free-Electron Lasers: Accelerator Physics, Instrumentation and Science Applications, 1367-1391. doi:10.1007/978-3-319-14394-1_43
Tjong, H., Li, W., Kalhor, R., Dai, C., Hao, S., Gong, K., Zhou, Y., Li, H., Zhou, X.J., Le Gros, M.A., Larabell, C.A., Chen, L., & Alber, F. (2016). Population-based 3D genome structure analysis reveals driving forces in spatial genome organization. Proceedings of the National Academy of Sciences, 113(12), E1663-E1672. doi:10.1073/pnas.1512577113
Myllys, M., Ruokolainen, V., Aho, V., Smith, E. A., Hakanen, S., Peri, P., Salvetti, A., Timonen, J., Hukkanen, V., Larabell, C.A., & Vihinen-Ranta, M. (2016). Herpes simplex virus 1 induces egress channels through marginalized host chromatin. Scientific Reports, 6(1), 28844. doi:10.1038/srep28844
Hammel, M., Amlanjyoti, D., Reyes, F. E., Chen, J. H., Parpana, R., Tang, H. Y., Larabell, C.A., Tainer, J.A., & Adhya, S. (2016). HU multimerization shift controls nucleoid compaction. Science Advances, 2(7), e1600650. doi:10.1126/sciadv.1600650
Darrow, M. C., Zhang, Y. J., Cinquin, B. P., Smith, E. A., Boudreau, R., Rochat, R. H., Schmid, M.F., Xia, Y., Larabell, C.A., & Chiu, W. (2016). Visualizing red blood cell sickling and the effects of inhibition of sphingosine kinase 1 using soft X-ray tomography. Journal of Cell Science, 129(18), 3511-3517. doi:10.1242/jcs.189225
2015
Ugarte, F., Sousae, R., Cinquin, B., Martin, E. W., Krietsch, J., Sanchez, G., Inman, M., Tsang, H., Warr, M., Passegue, E., Larabell, C.A., & Forsberg, E. C. (2015). Progressive Chromatin Condensation and H3K9 Methylation Regulate the Differentiation of Embryonic and Hematopoietic Stem Cells. Stem Cell Reports, 5(5), 728-740. doi:10.1016/j.stemcr.2015.09.009
Elgass, K. D., Smith, E. A., LeGros, M. A., Larabell, C. A., & Ryan, M. T. (2015). Analysis of ER-mitochondria contacts using correlative fluorescence microscopy and soft X-ray tomography of mammalian cells. Journal of Cell Science, 128(15), 2795-2804. doi:10.1242/jcs.169136
Do, M., Isaacson, S. A., McDermott, G., Le Gros, M. A., & Larabell, C. A. (2015). Imaging and characterizing cells using tomography. Arch Biochem Biophys, 581, 111-121. doi:10.1016/j.abb.2015.01.011
2014
Walters, Alison D., May, Christopher K., Dauster, Emma S., Cinquin, Bertrand P., Smith, Elizabeth A., Robellet, X., D’Amours, D., Larabell, C.A., & Cohen-Fix, O. (2014). The Yeast Polo Kinase Cdc5 Regulates the Shape of the Mitotic Nucleus. Current Biology, 24(23), 2861-2867. doi:10.1016/j.cub.2014.10.029
Smith, E. A., McDermott, G., Do, M., Leung, K., Panning, B., Le Gros, M. A., & Larabell, C. A. (2014). Quantitatively imaging chromosomes by correlated cryo-fluorescence and soft x-ray tomographies. Biophysical Journal, 107(8), 1988-1996. doi:10.1016/j.bpj.2014.09.011
Smith, E. A., Cinquin, B. P., Do, M., McDermott, G., Le Gros, M. A., & Larabell, C. A. (2014). Correlative cryogenic tomography of cells using light and soft x-rays. Ultramicroscopy, 143, 33-40. doi:10.1016/j.ultramic.2013.10.013
Le Gros, M. A., McDermott, G., Cinquin, B. P., Smith, E. A., Do, M., Chao, W. L., Naulleau, P.P., & Larabell, C. A. (2014). Biological soft X-ray tomography on beamline 2.1 at the Advanced Light Source. Journal of Synchrotron Radiation, 21(6), 1370-1377. doi:10.1107/S1600577514015033
Cinquin, B. P., Do, M., McDermott, G., Walters, A. D., Myllys, M., Smith, E. A., Cohen-Fix, O., Le Gros, M.A., & Larabell, C. A. (2014). Putting Molecules in Their Place. Journal of Cellular Biochemistry, 115(2), 209-216. doi:10.1002/jcb.24658
Dasgupta, S., Auth, T., Gov, Nir S., Satchwell, Timothy J., Hanssen, E., Zuccala, Elizabeth S., Riglar, D.T., Toye, A.M., Betz, T., Baum, J., & Gompper, G. (2014). Membrane-Wrapping Contributions to Malaria Parasite Invasion of the Human Erythrocyte. Biophysical Journal, 107(1), 43-54. doi:10.1016/j.bpj.2014.05.024
Patwardhan, A., Ashton, A., Brandt, R., Butcher, S., Carzaniga, R., Chiu, W., Collinson, L., Doux, P., Duke, E., Ellisman, MH., Franken, E., Grünewald, K., Heriche, J.K., Koster, A., Kühlbrandt, W., Lagerstedt, I., Larabell, C., Lawson, C.L., Saibil, H.R., Sanz-García, E., Subramaniam, S., Verkade, P., Swedlow, J.R., & Kleywegt, G. J. (2014). A 3D cellular context for the macromolecular world. Nat Struct Mol Biol, 21(10), 841-845. doi:10.1038/nsmb.2897
2013
Smith, E. A., Cinquin, B. P., McDermott, G., Le Gros, M. A., Parkinson, D. Y., Kim, H. T., & Larabell, C. A. (2013). Correlative microscopy methods that maximize specimen fidelity and data completeness, and improve molecular localization capabilities. Journal of Structural Biology, 184(1), 12-20. doi:10.1016/j.jsb.2013.03.006
Parkinson, D. Y., Epperly, L. R., McDermott, G., Le Gros, M. A., Boudreau, R. M., & Larabell, C. A. (2013). Nanoimaging cells using soft X-ray tomography. Methods Mol Biol, 950, 457-481. doi:10.1007/978-1-62703-137-0_25
Isaacson, S. A., Larabell, C. A., Le Gros, M. A., McQueen, D. M., & Peskin, C. S. (2013). The influence of spatial variation in chromatin density determined by X-ray tomograms on the time to find DNA binding sites. Bull Math Biol, 75(11), 2093-2117. doi:10.1007/s11538-013-9883-9
Hanssen, E., Dekiwadia, C., Riglar, D. T., Rug, M., Lemgruber, L., Cowman, A. F., Cyrklaff, M., Kudryashev, M., Frischknecht, F., Baum, J., & Ralph, S. A. (2013). Electron tomography of Plasmodium falciparum merozoites reveals core cellular events that underpin erythrocyte invasion. Cellular Microbiology, 15(9), 1457-1472. doi:10.1111/cmi.12132
Le Gros, M. A., Knoechel, C. G., Uchida, M., Parkinson, D. Y., McDermott, G., & Larabell, C. A. (2012). Visualizing Sub-cellular Organization Using Soft X-ray Tomography. In E. H. Egelman (Ed.), Comprehensive Biophysics (pp. 90 – 110). Amsterdam: Elsevier
2012
Clowney, E. J., LeGros, Mark A., Mosley, Colleen P., Clowney, Fiona G., Markenskoff-Papadimitriou, Eirene C., Myllys, M., Barnea, G., Larabell, C., & Lomvardas, S. (2012). Nuclear Aggregation of Olfactory Receptor Genes Governs Their Monogenic Expression. Cell, 151(4), 724-737. doi:10.1016/j.cell.2012.09.043
Parkinson, D. Y., Knoechel, C., Yang, C., Larabell, C. A., & Le Gros, M. A. (2012). Automatic alignment and reconstruction of images for soft X-ray tomography. Journal of Structural Biology, 177(2), 259-266. doi:10.1016/j.jsb.2011.11.027
McDermott, G., Le Gros, M. A., & Larabell, C. A. (2012). Visualizing Cell Architecture and Molecular Location Using Soft X-Ray Tomography and Correlated Cryo-Light Microscopy. Annual Review of Physical Chemistry, Vol 63, 63, 225-239. doi:10.1146/annurev-physchem-032511-143818
McDermott, G., Fox, D. M., Epperly, L., Wetzler, M., Barron, A. E., Le Gros, M. A., & Larabell, C. A. (2012). Visualizing and quantifying cell phenotype using soft X-ray tomography. BioEssays, 34(4), 320-327. doi:10.1002/bies.201100125
Hanssen, E., Knoechel, C., Dearnley, M., Dixon, M. W., Le Gros, M., Larabell, C., & Tilley, L. (2012). Soft X-ray microscopy analysis of cell volume and hemoglobin content in erythrocytes infected with asexual and sexual stages of Plasmodium falciparum. Journal of Structural Biology, 177(2), 224-232. doi:10.1016/j.jsb.2011.09.003
Murphy, S. V., Lim, R., Heraud, P., Cholewa, M., Le Gros, M., de Jonge, M. D., Howard, D.L., Paterson, D., McDonald, C., Atala, A., Jenkin, G., & Wallace, E. M. (2012). Human Amnion Epithelial Cells Induced to Express Functional Cystic Fibrosis Transmembrane Conductance Regulator. PLoS ONE, 7(9), e46533. doi:10.1371/journal.pone.0046533
2011
Uchida, M., Sun, Y., McDermott, G., Knoechel, C., Le Gros, M. A., Parkinson, D., Drubin, D.G., & Larabell, C. A. (2011). Quantitative analysis of yeast internal architecture using soft X-ray tomography. Yeast, 28(3), 227-236. doi:10.1002/yea.1834
Hanssen, E., Knoechel, C., Klonis, N., Abu-Bakar, N., Deed, S., LeGros, M., Larabell, C., & Tilley, L. (2011). Cryo transmission X-ray imaging of the malaria parasite, P. falciparum. Journal of Structural Biology, 173(1), 161-168. doi:10.1016/j.jsb.2010.08.013
2010
Larabell, C. A., & Nugent, K. A. (2010). Imaging cellular architecture with X-rays. Curr Opin Struct Biol, 20(5), 623-631. doi:10.1016/j.sbi.2010.08.008
2009
Uchida, M., McDermott, G., Wetzler, M., Le Gros, M. A., Myllys, M., Knoechel, C., Barron, A.E., & Larabell, C. A. (2009). Soft X-ray tomography of phenotypic switching and the cellular response to antifungal peptoids in Candida albicans. Proceedings of the National Academy of Sciences, 106(46), 19375. doi:10.1073/pnas.0906145106
McDermott, G., Le Gros, M. A., Knoechel, C. G., Uchida, M., & Larabell, C. A. (2009). Soft X-ray tomography and cryogenic light microscopy: the cool combination in cellular imaging. Trends in Cell Biology, 19(11), 587-595. doi:10.1016/j.tcb.2009.08.005
Le Gros, M. A., McDermott, G., Uchida, M., Knoechel, C. G., & Larabell, C. A. (2009). High-aperture cryogenic light microscopy. Journal of Microscopy, 235(1), 1-8. doi:10.1111/j.1365-2818.2009.03184.x
2008
Parkinson, D. Y., McDermott, G., Etkin, L. D., Le Gros, M. A., & Larabell, C. A. (2008). Quantitative 3-D imaging of eukaryotic cells using soft X-ray tomography. Journal of Structural Biology, 162(3), 380-386. doi:10.1016/j.jsb.2008.02.003
Ashcroft, J. M., Gu, W., Zhang, T., Hughes, S. M., Hartman, K. B., Hofmann, C., Kanaras, A.G., Kilcoyne, D.A., Le Gros, M., Yin, Y., Alivisatos, A.P., & Larabell, C.A. (2008). TiO2 nanoparticles as a soft X-ray molecular probe. Chemical Communications, 21, 2471-2473. doi:10.1039/b801392f
2007
Tang, Y. J., Ashcroft, J. M., Chen, D., Min, G., Kim, C.-H., Murkhejee, B., Larabell, C., Keasling, J.D., & Chen, F. F. (2007). Charge-Associated Effects of Fullerene Derivatives on Microbial Structural Integrity and Central Metabolism. Nano Letters, 7(3), 754-760. doi:10.1021/nl063020t
Gu, W., Etkin, L. D., Le Gros, M. A., & Larabell, C. A. (2007). X-ray tomography of Schizosaccharomyces pombe. Differentiation, 75(6), 529-535. doi:10.1111/j.1432-0436.2007.00180.x
2006
Attwood, D., Chao, W., Anderson, E. H., Liddle, J. A., Harteneck, B. D., Fisher, P., Schneider, G., Le Gros, M., & Larabell, C. (2006). Imaging at High Spatial Resolution: Soft X-ray Microscopy to 15 nm. Journal of Biomedical Nanotechnology, 2(2), 75-78.
2005
Fu, A., Gu, W., Larabell, C., & Alivisatos, A. P. (2005). Semiconductor nanocrystals for biological imaging. Current Opinion in Neurobiology, 15(5), 568-575. doi:10.1016/j.conb.2005.08.004
2004
Larabell, C.A., & Le Gros, M.A. (2004). Whole cell cryo X-ray tomography and protein localization at 50 nanometer resolution. Biophysical Journal, 86, 185A-185A.
Larabell, C. A., & Le Gros, M. A. (2004). X-ray tomography generates 3-D reconstructions of the yeast, Saccharomyces cerevisiae, at 60-nm resolution. Molecular Biology of the Cell, 15(3), 957-962. doi:10.1091/mbc.E03-07-0522
2003
Weaver, C., Farr, G. H., III, Pan, W., Rowning, B. A., Wang, J., Mao, J., Wu, D., Li, L., Larabell, C.A., & Kimelman, D. (2003). GBP binds kinesin light chain and translocates during cortical rotation in Xenopus eggs. Development, 130(22), 5425-5436. doi:10.1242/dev.00737
Pellegrino, T., Parak, W. J., Boudreau, R., Le gros, M. A., Gerion, D., Alivisatos, A. P., & Larabell, C. A. (2003). Quantum dot-based cell motility assay. Differentiation, 71(9), 542-548. doi:10.1111/j.1432-0436.2003.07109006.x
Parak, W. J., Gerion, D., Pellegrino, T., Zanchet, D., Micheel, C., Williams, S. C., Boudreau, R., Gros, M.A.L., Larabell, C.A., & Alivisatos, A. P. (2003). Biological applications of colloidal nanocrystals. Nanotechnology, 14(7), R15-R27. doi:10.1088/0957-4484/14/7/201
2002
Parak, W. J., Boudreau, R., Le Gros, M., Gerion, D., Zanchet, D., Micheel, C. M., Williams, S.C., Alivisatos, A.P., & Larabell, C. (2002). Cell Motility and Metastatic Potential Studies Based on Quantum Dot Imaging of Phagokinetic Tracks. Advanced Materials, 14(12), 882-885. doi:10.1002/1521-4095(20020618)14:12<882::AID-ADMA882>3.0.CO;2-Y
2001
Denbeaux, G., Anderson, E., Chao, W., Eimüller, T., Johnson, L., Köhler, M., Larabell, C.A., Le Gros, M.A., Fischer, P., Pearson, A., Schütz, G., Yager, D., & Attwood, D. (2001). Soft X-ray microscopy to 25nm with applications to biology and magnetic materials. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 467-468, doi:10.1016/s0168-9002(01)00480-6