Coale TH, Loconte V, Turk-Kubo KA, Vanslembrouck B, Mak WKE, Cheung S, Ekman A, Chen JH, Hagino K, Takano Y, Nishimura T, Adachi M, Le Gros M, Larabell C, Zehr JP. (2024) Nitrogen-fixing organelle in a marine alga. Science.  doi: 10.1126/science.adk1075.

Leclerc, S., Gupta, A., Ruokolainen, V., Chen, J.H., Kunnas, K., Ekman, A.A., Niskanen, H., Belevich, I., Vihinen, H., Turkki, P., Perez-Berna, A.J., Kapishnikov, S., Mäntylä, E., Harkiolaki, M., Dufour, E., Hytönen, V., Pereiro, E., McEnroe, T., Fahy, K., Kaikkonen, M.U., Jokitalo, E., Larabell, C.A., Weinhardt, V., Mattola, S., Aho, V. & Vihinen-Ranta, M. (2024) Progression of herpesvirus infection remodels mitochondrial organization and metabolism. PLOS Pathogens.


Leclerc, S., Gupta, A., Ruokolainen, V., Chen, J.H., Kunnas, K., Ekman, A.A., Niskanen, H., Belevich, I., Vihinen, H., Turkki, P., Perez-Berna, A.J., Kapishnikov, S., Mäntylä, E., Harkiolaki, M., Dufour, E., Hytönen, V., Pereiro, E., McEnroe, T., Fahy, K., Kaikkonen, M.U., Jokitalo, E., Larabell, C.A., Weinhardt, V., Mattola, S., Aho, V. & Vihinen-Ranta, M. (2023) Progression of herpesvirus infection remodels mitochondrial organization and metabolism.  bioRxiv doi:

Eng, T., Banerjee, D., Menasalvas, J., Chen, Y., Gin, J., Choudhary, H., Baidoo, E., Chen, J.H., Ekman, A., Kakumanu, R., Diercks, Y.L., Codik, A., Larabell, C., Gladden, J., Simmons, B.A., Keasling, J.D., Petzold, C.J. & Mukhopadhyay, A. (2023) Maximizing microbial bioproduction from sustainable carbon sources using iterative systems engineering. Cell Rep. doi: 10.1016/j.celrep.2023.113087. 

de Klerk, E., Xiao, Y., Emfinger, C.H., Keller, M.P., Berrios, D.I., Loconte, V., Ekman, A.A., White, K.L., Cardone, R.L., Kibbey, R.G., Attie, A.D. & Hebrok, M. (2023) Loss of ZNF148 enhances insulin secretion in human pancreatic β cells. JCI Insight. doi: 10.1172/jci.insight.157572.

Sontag, E. M., Morales-Polanco, F., Chen, J.-H., McDermott, G., Dolan, P.T., Gestaut, D., Le Gros, M.A., Larabell, C., & Frydman, J. (2023) Nuclear and cytoplasmic spatial protein quality control is coordinated by nuclear–vacuolar junctions and perinuclear ESCRTNat. Cell Biol. doi:10.1038/s41556-023-01128-6

Boeynaems, S., Ma, X.R., Yeong, V., Ginell, G.M., Chen, J.-H., Blum, J.A., Nakayama, L., Sanyal, A., Briner, A., Van Haver, D., Pauwels, J., Ekman, A., Schmidt, H. B., Sundararajan, K., Porta, L., Lasker, K., Larabell, C., Hayashi, M.A.F., Kundaje, A., Impens, F., Obermeyer, A., Holehouse, A.S., & Gitler, A.D. (2023) Aberrant phase separation is a common killing strategy of positively charged peptides in biology and human diseasebioRxiv 2023.03.09.531820; doi:10.1101/2023.03.09.531820

Ekman, A., Chen, J.-H., Vanslembrouck, B., Loconte, V., Larabell, C., Le Gros, M., & Weinhardt, V. (2023) Extending of imaging volume in soft x-ray tomographyAdv. Photonics Res. 2200142. doi:10.1002/adpr.202200142

Loconte, V., Chen, J.-H., Vanslembrouck, B., Ekman, A.A. McDermott, G., Le Gros, M.A., & Larabell, C.A. (2023) Soft X-ray tomograms provide a structural basis for whole-cell modelingThe FASEB Journal, 37:e22681. doi:10.1096/fj.202200253R


Chen, J.-H., Vanslembrouck, B., Ekman, A., Aho, V., Larabell, C.A., Le Gros, M.A., Vihinen-Ranta, M., & Weinhardt, V. (2022) Soft X-ray Tomography Reveals HSV-1-Induced Remodeling of Human B CellsViruses 14, 2651. doi:10.3390/v14122651

Li, A., Zhang, S., Loconte, V., Liu, Y., Ekman, A., Thompson, G.J., Sali, A., Stevens, C.R., White, K., Singla, J., & Sun, L. (2022) An intensity-based post-processing tool for 3D instance segmentation of organelles in soft X-ray tomogramsPLoS ONE 17(9): e0269887. doi:10.1371/journal.pone.0269887

Autin, L., Barbaro, B., Jewett, A., Ekman, A., Verma, S., Olson, A., & Goodsell, D. (2022). Integrative structural modelling and visualisation of a cellular organelleQRB Discovery, 3, E11. doi:10.1017/qrd.2022.10

Hueschen, C.L., Zarko L.S., Chen, J.H., LeGros, M.A., Larabell, C.A., Boothroyd, J.C., Phillips, & R., Dunn, A.R. (2022). Emergent Actin Flows Explain Diverse Parasite Gliding ModesbioRxiv, 495399; doi: 10.1101/2022.06.08.49539

Vanslembrouck, B., Chen, J.-H., Larabell, C., & van Hengel, J. (2022). Microscopic Visualization of Cell-Cell Adhesion Complexes at Micro and Nanoscale. Front. Cell Dev. Biol., 10:819534. doi:10.3389/fcell.2022.819534

Li, A., Zhang, X., Singla, J., White, K.L., Loconte, V., Hu, C., Zhang, C., Li, S., Li, W., Francis, J.P., Wang, C., Sali, A., Sun, L., He, X., & Stevens, R. (2022). Auto-segmentation and time-dependent systematic analysis of mesoscale cellular structure in β-cells during insulin secretionPLoS ONE, 17(3), e0265567. doi:10.1371/journal.pone.0265567

Loconte, V., Singla, J., Li, A., Chen, J.-H., Ekman, A., McDermott, G., Sali, A., Le Gros, M., White, K.L., & Larabell, C. A. (2022). Soft X-ray tomography to map and quantify organelle interactions at the mesoscaleStructure, 30, 1-12. doi:10.1016/j.str.2022.01.006

Chen, J.-H., Vanslembrouck, B., Loconte, V., Ekman, A., Cortese, M., Bartenschlager, R., McDermott, G., Larabell, C.A., Le Gros, M.A., & Weinhardt, V. (2022). A protocol for full-rotation soft X-ray tomography of single cellsSTAR Protocols, 3(1), 101176. doi:10.1016/j.xpro.2022.101176


Loconte, V., & White, K. L. (2021). The use of soft X-ray tomography to explore mitochondrial structure and functionMolecular Metabolism, 101421. doi:10.1016/j.molmet.2021.101421

Loconte, V., Chen, J.H., Cortese, M., Ekman, A., Le Gros, M.A., Larabell, C.A., Bartenschlager, R., & Weinhardt, V. (2021). Using soft X-ray tomography for rapid whole-cell quantitative imaging of SARS-CoV-2-infected cellsCell Reports Methods, 1(7), 100117. doi:10.1016/j.crmeth.2021.100117

Raveh, B., Sun, L., White, K. L., Sanyal, T., Tempkin, J., Zheng, D., Bharat, K., Singla, J., Wang, C.X., Zhao, J., Li, A., Graham, N.A., Kesselman, C., Stevens, R.C., & Sali, A. (2021). Bayesian metamodeling of complex biological systems across varying representations. Proceedings of the National Academy of Sciences, 118(35), e2104559118. doi:10.1073/pnas.2104559118

Levine, Z. H., Garboczi, E. J., Peskin, A. P., Ekman, A. A., Mansfield, E., & Holm, J. D. (2021). X-ray computed tomography using partially coherent Fresnel diffraction with application to an optical fiberOptics Express, 29(2), 1788-1804. doi:10.1364/OE.414398


White, K. L., Singla, J., Loconte, V., Chen, J. H., Ekman, A., Sun, L., Zhang, X., Francis, J.P., Li, A., Lin, W., Tseng, K., McDermott, G., Alber, F., Sali, A., Larabell, C., & Stevens, R. C. (2020). Visualizing subcellular rearrangements in intact β cells using soft x-ray tomographyScience Advances, 6(50), 1-13. doi:10.1126/sciadv.abc8262

Polo, C. C., Fonseca-Alaniz, M. H., Chen, J. H., Ekman, A., McDermott, G., Meneau, F., Krieger, J.E., & Miyakawa, A. A. (2020). Three-dimensional imaging of mitochondrial cristae complexity using cryo-soft X-ray tomographyScientific Reports, 10(1), 1-8. doi:10.1038/s41598-020-78150-3

Weinhardt, V., Chen, J. H., Ekman, A. A., Guo, J., Remesh, S. G., Hammel, M., McDermott, G., Chao, W., Oh, S., Le Gros, M.A., & Larabell, C. A. (2020). Switchable resolution in soft x-ray tomography of single cellsPLoS ONE, 15(1), 1-14. doi:10.1371/journal.pone.0227601

Remesh, S. G., Verma, S. C., Chen, J. H., Ekman, A. A., Larabell, C. A., Adhya, S., & Hammel, M. (2020). Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundlingNature Communications, 11(1), 1-12. doi:10.1038/s41467-020-16724-5

Ma, J., Do, M., Le Gros, M. A., Peskin, C. S., Larabell, C. A., Mori, Y., & Isaacson, S. A. (2020). Strong intracellular signal inactivation produces sharper and more robust signaling from cell membrane to nucleusPLoS Computational Biology, 16(11), 1-19. doi:10.1371/journal.pcbi.1008356


Guo, J., & Larabell, C. A. (2019). Soft X-ray tomography: virtual sculptures from cell culturesCurrent Opinion in Structural Biology, 58, 324-332. doi:10.1016/

Weinhardt, V., Chen, J. H., Ekman, A., McDermott, G., Le Gros, M. A., & Larabell, C. (2019). Imaging cell morphology and physiology using X-raysBiochemical Society Transactions, 47, 489-508. doi:10.1042/BST20180036

Walters, A. D., Amoateng, K., Wang, R., Chen, J.-H., McDermott, G., Larabell, C. A., Gadal, O., & Cohen-Fix, O. (2018). Nuclear envelope expansion in budding yeast is independent of cell growth and does not determine nuclear volumeMolecular Biology of the Cell, 30(1), 131-145. doi:10.1091/mbc.E18-04-0204

Roth, M. S., Gallaher, S. D., Westcott, D. J., Iwai, M., Louie, K. B., Mueller, M., Walter, A., Foflonker, F., Bowen, B.P., Ataii, N.N., Song, J., Chen, J.H., Blaby-Haas, C.E., Larabell, C., Auer, M., Northen, T.R., Merchant, S.S., & Niyogi, K. K. (2019). Regulation of oxygenic photosynthesis during trophic transitions in the green alga Chromochloris ZofingiensisPlant Cell, 31(3), 579-601. doi:10.1105/tpc.18.00742

Boeynaems, S., Holehouse, A. S., Weinhardt, V., Kovacs, D., Van Lindt, J., Larabell, C., Van Den Bosch, L., Das, R., Tompa, P.S., Pappu, R.V., & Gitler, A. D. (2019). Spontaneous driving forces give rise to protein−RNA condensates with coexisting phases and complex material propertiesProceedings of the National Academy of Sciences, 116(16), 7889. doi:10.1073/pnas.1821038116

Aho, V., Mäntylä, E., Ekman, A., Hakanen, S., Mattola, S., Chen, J.-H., Weinhardt, V., Ruokolainen, V., Sodeik, B., Larabell, C., & Vihinen-Ranta, M. (2019). Quantitative Microscopy Reveals Stepwise Alteration of Chromatin Structure during Herpesvirus InfectionViruses, 11(10). doi:10.3390/v11100935


Smallwood, C. R., Chrisler, W., Chen, J.-H., Patello, E., Thomas, M., Boudreau, R., Ekman, A., Wang, H., McDermott, G., & Evans, J. E. (2018). Ostreococcus tauri is a high-lipid content green algae that extrudes clustered lipid dropletsbioRxiv, 249052. doi:10.1101/249052

Smallwood, C. R., Chen, J.-H., Kumar, N., Chrisler, W., Purvine, S. O., Kyle, J. E., Nicora, C.D., Boudreau, R., Ekman, A., Hixson, K.K., Moore, R.J., McDermott, G., Cannon, W.R., & Evans, J. E. (2018). Integrated systems biology and imaging of the smallest free-living eukaryote Ostreococcus tauribioRxiv, 293704. doi:10.1101/293704

Pelt, D. M., & Sethian, J. A. (2018). A mixed-scale dense convolutional neural network for image analysisProceedings of the National Academy of Sciences, 115(2), 254. doi:10.1073/pnas.1715832114

Mehta, A. P., Supekova, L., Chen, J.-H., Pestonjamasp, K., Webster, P., Ko, Y., Henderson, S.C., McDermott, G., Supek, F., & Schultz, P. G. (2018). Engineering yeast endosymbionts as a step toward the evolution of mitochondriaProceedings of the National Academy of Sciences, 115(46), 11796. doi:10.1073/pnas.1813143115

Ekman, A., Weinhardt, V., Chen, J. H., McDermott, G., Le Gros, M. A., & Larabell, C. (2018). PSF correction in soft X-ray tomographyJournal of Structural Biology, 204(1), 9-18. doi:10.1016/j.jsb.2018.06.003


Dekker, J., Belmont, A. S., Guttman, M., Leshyk, V. O., Lis, J. T., Lomvardas, S., Mirny, L.A., O’Shea, C.C., Park, P.J., Ren, B., Ritland Politz, J.C., Shendure, J., Zhong, S., & the 4D Nucleome Network. (2017). The 4D nucleome projectNature, 549(7671), 219-226. doi:10.1038/nature23884

Roth, M. S., Cokus, S. J., Gallaher, S. D., Walter, A., Lopez, D., Erickson, E., Endelman, B., Westcott, D., Larabell, C.A., Merchant, S.S., Pellegrini, M., & Niyogi, K. K. (2017). Chromosome-level genome assembly and transcriptome of the green alga Chromochloris zofingiensis illuminates astaxanthin productionProceedings of the National Academy of Sciences, 114(21), E4296. doi:10.1073/pnas.1619928114

Chongsiriwatana, N. P., Lin, J. S., Kapoor, R., Wetzler, M., Rea, J. A. C., Didwania, M. K., Contag, C.H., & Barron, A. E. (2017). Intracellular biomass flocculation as a key mechanism of rapid bacterial killing by cationic, amphipathic antimicrobial peptides and peptoidsScientific Reports, 7(1), 16718. doi:10.1038/s41598-017-16180-0

Ekman, A. A., Chen, J. H., Guo, J., McDermott, G., Le Gros, M. A., & Larabell, C. A. (2017). Mesoscale imaging with cryo-light and X-rays: Larger than molecular machines, smaller than a cellBiology of the Cell, 109(1), 24-38. doi:10.1111/boc.201600044

Aho, V., Myllys, M., Ruokolainen, V., Hakanen, S., Mantyla, E., Virtanen, J., Hukkanen, V., Kuhn, T., Timonen, J., Mattila, K., Larabell, C.A. & Vihinen-Ranta, M. (2017). Chromatin organization regulates viral egress dynamicsScientific Reports, 7, doi:10.1038/s41598-017-03630-y

Seo, A. Y., Lau, P.-W., Feliciano, D., Sengupta, P., Gros, M. A. L., Cinquin, B., Larabell, C.A., & Lippincott-Schwartz, J. (2017). AMPK and vacuole-associated Atg14p orchestrate μ-lipophagy for energy production and long-term survival under glucose starvationeLife, 6, e21690. doi:10.7554/eLife.21690


LeGros, M. A., Clowney, E. J., Magklara, A., Yen, A., Markenscoff-Papadimitriou, E., Colquitt, B., Myllys, M., Kellis, M., Lomvardas, S., & Larabell, C. A. (2016). Soft x-ray tomography reveals gradual chromatin compaction and reorganization during neurogenesis in vivoCell Report, 17(8), 2125-2136. doi:10.1016/j.celrep.2016.10.060

LeGros, M. A., Chen, J.-H., Do, M., McDermott, G., & Larabell, C. A. (2016). Putting Molecules in the Picture: Using Correlated Light Microscopy and Soft X-Ray Tomography to Study Cells. Synchrotron Light Sources and Free-Electron Lasers: Accelerator Physics, Instrumentation and Science Applications, 1367-1391. doi:10.1007/978-3-319-14394-1_43

Tjong, H., Li, W., Kalhor, R., Dai, C., Hao, S., Gong, K., Zhou, Y., Li, H., Zhou, X.J., Le Gros, M.A., Larabell, C.A., Chen, L., & Alber, F. (2016). Population-based 3D genome structure analysis reveals driving forces in spatial genome organizationProceedings of the National Academy of Sciences, 113(12), E1663-E1672. doi:10.1073/pnas.1512577113

Myllys, M., Ruokolainen, V., Aho, V., Smith, E. A., Hakanen, S., Peri, P., Salvetti, A., Timonen, J., Hukkanen, V., Larabell, C.A., & Vihinen-Ranta, M. (2016). Herpes simplex virus 1 induces egress channels through marginalized host chromatinScientific Reports, 6(1), 28844. doi:10.1038/srep28844

Hammel, M., Amlanjyoti, D., Reyes, F. E., Chen, J. H., Parpana, R., Tang, H. Y., Larabell, C.A., Tainer, J.A., & Adhya, S. (2016). HU multimerization shift controls nucleoid compactionScience Advances, 2(7), e1600650. doi:10.1126/sciadv.1600650

Darrow, M. C., Zhang, Y. J., Cinquin, B. P., Smith, E. A., Boudreau, R., Rochat, R. H., Schmid, M.F., Xia, Y., Larabell, C.A., & Chiu, W. (2016). Visualizing red blood cell sickling and the effects of inhibition of sphingosine kinase 1 using soft X-ray tomographyJournal of Cell Science, 129(18), 3511-3517. doi:10.1242/jcs.189225


Ugarte, F., Sousae, R., Cinquin, B., Martin, E. W., Krietsch, J., Sanchez, G., Inman, M., Tsang, H., Warr, M., Passegue, E., Larabell, C.A., & Forsberg, E. C. (2015). Progressive Chromatin Condensation and H3K9 Methylation Regulate the Differentiation of Embryonic and Hematopoietic Stem CellsStem Cell Reports, 5(5), 728-740. doi:10.1016/j.stemcr.2015.09.009

Elgass, K. D., Smith, E. A., LeGros, M. A., Larabell, C. A., & Ryan, M. T. (2015). Analysis of ER-mitochondria contacts using correlative fluorescence microscopy and soft X-ray tomography of mammalian cellsJournal of Cell Science, 128(15), 2795-2804. doi:10.1242/jcs.169136

Do, M., Isaacson, S. A., McDermott, G., Le Gros, M. A., & Larabell, C. A. (2015). Imaging and characterizing cells using tomographyArch Biochem Biophys, 581, 111-121. doi:10.1016/


Walters, Alison D., May, Christopher K., Dauster, Emma S., Cinquin, Bertrand P., Smith, Elizabeth A., Robellet, X., D’Amours, D., Larabell, C.A., & Cohen-Fix, O. (2014). The Yeast Polo Kinase Cdc5 Regulates the Shape of the Mitotic NucleusCurrent Biology, 24(23), 2861-2867. doi:10.1016/j.cub.2014.10.029

Smith, E. A., McDermott, G., Do, M., Leung, K., Panning, B., Le Gros, M. A., & Larabell, C. A. (2014). Quantitatively imaging chromosomes by correlated cryo-fluorescence and soft x-ray tomographiesBiophysical Journal, 107(8), 1988-1996. doi:10.1016/j.bpj.2014.09.011

Smith, E. A., Cinquin, B. P., Do, M., McDermott, G., Le Gros, M. A., & Larabell, C. A. (2014). Correlative cryogenic tomography of cells using light and soft x-raysUltramicroscopy, 143, 33-40. doi:10.1016/j.ultramic.2013.10.013

Le Gros, M. A., McDermott, G., Cinquin, B. P., Smith, E. A., Do, M., Chao, W. L., Naulleau, P.P., & Larabell, C. A. (2014). Biological soft X-ray tomography on beamline 2.1 at the Advanced Light SourceJournal of Synchrotron Radiation, 21(6), 1370-1377. doi:10.1107/S1600577514015033

Cinquin, B. P., Do, M., McDermott, G., Walters, A. D., Myllys, M., Smith, E. A., Cohen-Fix, O., Le Gros, M.A., & Larabell, C. A. (2014). Putting Molecules in Their PlaceJournal of Cellular Biochemistry, 115(2), 209-216. doi:10.1002/jcb.24658

Dasgupta, S., Auth, T., Gov, Nir S., Satchwell, Timothy J., Hanssen, E., Zuccala, Elizabeth S., Riglar, D.T., Toye, A.M., Betz, T., Baum, J., & Gompper, G. (2014). Membrane-Wrapping Contributions to Malaria Parasite Invasion of the Human ErythrocyteBiophysical Journal, 107(1), 43-54. doi:10.1016/j.bpj.2014.05.024

Patwardhan, A., Ashton, A., Brandt, R., Butcher, S., Carzaniga, R., Chiu, W., Collinson, L., Doux, P., Duke, E., Ellisman, MH., Franken, E., Grünewald, K., Heriche, J.K., Koster, A., Kühlbrandt, W., Lagerstedt, I., Larabell, C., Lawson, C.L., Saibil, H.R., Sanz-García, E., Subramaniam, S., Verkade, P., Swedlow, J.R., & Kleywegt, G. J. (2014). A 3D cellular context for the macromolecular worldNat Struct Mol Biol, 21(10), 841-845. doi:10.1038/nsmb.2897


Smith, E. A., Cinquin, B. P., McDermott, G., Le Gros, M. A., Parkinson, D. Y., Kim, H. T., & Larabell, C. A. (2013). Correlative microscopy methods that maximize specimen fidelity and data completeness, and improve molecular localization capabilitiesJournal of Structural Biology, 184(1), 12-20. doi:10.1016/j.jsb.2013.03.006

Parkinson, D. Y., Epperly, L. R., McDermott, G., Le Gros, M. A., Boudreau, R. M., & Larabell, C. A. (2013). Nanoimaging cells using soft X-ray tomographyMethods Mol Biol, 950, 457-481. doi:10.1007/978-1-62703-137-0_25

Isaacson, S. A., Larabell, C. A., Le Gros, M. A., McQueen, D. M., & Peskin, C. S. (2013). The influence of spatial variation in chromatin density determined by X-ray tomograms on the time to find DNA binding sitesBull Math Biol, 75(11), 2093-2117. doi:10.1007/s11538-013-9883-9

Hanssen, E., Dekiwadia, C., Riglar, D. T., Rug, M., Lemgruber, L., Cowman, A. F., Cyrklaff, M., Kudryashev, M., Frischknecht, F., Baum, J., & Ralph, S. A. (2013). Electron tomography of Plasmodium falciparum merozoites reveals core cellular events that underpin erythrocyte invasionCellular Microbiology, 15(9), 1457-1472. doi:10.1111/cmi.12132

Le Gros, M. A., Knoechel, C. G., Uchida, M., Parkinson, D. Y., McDermott, G., & Larabell, C. A. (2012). Visualizing Sub-cellular Organization Using Soft X-ray Tomography. In E. H. Egelman (Ed.), Comprehensive Biophysics (pp. 90 – 110). Amsterdam: Elsevier


Clowney, E. J., LeGros, Mark A., Mosley, Colleen P., Clowney, Fiona G., Markenskoff-Papadimitriou, Eirene C., Myllys, M., Barnea, G., Larabell, C., & Lomvardas, S. (2012). Nuclear Aggregation of Olfactory Receptor Genes Governs Their Monogenic ExpressionCell, 151(4), 724-737. doi:10.1016/j.cell.2012.09.043

Parkinson, D. Y., Knoechel, C., Yang, C., Larabell, C. A., & Le Gros, M. A. (2012). Automatic alignment and reconstruction of images for soft X-ray tomographyJournal of Structural Biology, 177(2), 259-266. doi:10.1016/j.jsb.2011.11.027

McDermott, G., Le Gros, M. A., & Larabell, C. A. (2012). Visualizing Cell Architecture and Molecular Location Using Soft X-Ray Tomography and Correlated Cryo-Light MicroscopyAnnual Review of Physical Chemistry, Vol 63, 63, 225-239. doi:10.1146/annurev-physchem-032511-143818

McDermott, G., Fox, D. M., Epperly, L., Wetzler, M., Barron, A. E., Le Gros, M. A., & Larabell, C. A. (2012). Visualizing and quantifying cell phenotype using soft X-ray tomographyBioEssays, 34(4), 320-327. doi:10.1002/bies.201100125

Hanssen, E., Knoechel, C., Dearnley, M., Dixon, M. W., Le Gros, M., Larabell, C., & Tilley, L. (2012). Soft X-ray microscopy analysis of cell volume and hemoglobin content in erythrocytes infected with asexual and sexual stages of Plasmodium falciparumJournal of Structural Biology, 177(2), 224-232. doi:10.1016/j.jsb.2011.09.003

Murphy, S. V., Lim, R., Heraud, P., Cholewa, M., Le Gros, M., de Jonge, M. D., Howard, D.L., Paterson, D., McDonald, C., Atala, A., Jenkin, G., & Wallace, E. M. (2012). Human Amnion Epithelial Cells Induced to Express Functional Cystic Fibrosis Transmembrane Conductance RegulatorPLoS ONE, 7(9), e46533. doi:10.1371/journal.pone.0046533


Uchida, M., Sun, Y., McDermott, G., Knoechel, C., Le Gros, M. A., Parkinson, D., Drubin, D.G., & Larabell, C. A. (2011). Quantitative analysis of yeast internal architecture using soft X-ray tomographyYeast, 28(3), 227-236. doi:10.1002/yea.1834

Hanssen, E., Knoechel, C., Klonis, N., Abu-Bakar, N., Deed, S., LeGros, M., Larabell, C., & Tilley, L. (2011). Cryo transmission X-ray imaging of the malaria parasite, P. falciparumJournal of Structural Biology, 173(1), 161-168. doi:10.1016/j.jsb.2010.08.013


Larabell, C. A., & Nugent, K. A. (2010). Imaging cellular architecture with X-raysCurr Opin Struct Biol, 20(5), 623-631. doi:10.1016/


Uchida, M., McDermott, G., Wetzler, M., Le Gros, M. A., Myllys, M., Knoechel, C., Barron, A.E., & Larabell, C. A. (2009). Soft X-ray tomography of phenotypic switching and the cellular response to antifungal peptoids in Candida albicansProceedings of the National Academy of Sciences, 106(46), 19375. doi:10.1073/pnas.0906145106

McDermott, G., Le Gros, M. A., Knoechel, C. G., Uchida, M., & Larabell, C. A. (2009). Soft X-ray tomography and cryogenic light microscopy: the cool combination in cellular imagingTrends in Cell Biology, 19(11), 587-595. doi:10.1016/j.tcb.2009.08.005

Le Gros, M. A., McDermott, G., Uchida, M., Knoechel, C. G., & Larabell, C. A. (2009). High-aperture cryogenic light microscopyJournal of Microscopy, 235(1), 1-8. doi:10.1111/j.1365-2818.2009.03184.x


Parkinson, D. Y., McDermott, G., Etkin, L. D., Le Gros, M. A., & Larabell, C. A. (2008). Quantitative 3-D imaging of eukaryotic cells using soft X-ray tomographyJournal of Structural Biology, 162(3), 380-386. doi:10.1016/j.jsb.2008.02.003

Ashcroft, J. M., Gu, W., Zhang, T., Hughes, S. M., Hartman, K. B., Hofmann, C., Kanaras, A.G., Kilcoyne, D.A., Le Gros, M., Yin, Y., Alivisatos, A.P., & Larabell, C.A. (2008). TiO2 nanoparticles as a soft X-ray molecular probeChemical Communications, 21, 2471-2473. doi:10.1039/b801392f


Tang, Y. J., Ashcroft, J. M., Chen, D., Min, G., Kim, C.-H., Murkhejee, B., Larabell, C., Keasling, J.D., & Chen, F. F. (2007). Charge-Associated Effects of Fullerene Derivatives on Microbial Structural Integrity and Central MetabolismNano Letters, 7(3), 754-760. doi:10.1021/nl063020t

Gu, W., Etkin, L. D., Le Gros, M. A., & Larabell, C. A. (2007). X-ray tomography of Schizosaccharomyces pombeDifferentiation, 75(6), 529-535. doi:10.1111/j.1432-0436.2007.00180.x


Attwood, D., Chao, W., Anderson, E. H., Liddle, J. A., Harteneck, B. D., Fisher, P., Schneider, G., Le Gros, M., & Larabell, C. (2006). Imaging at High Spatial Resolution: Soft X-ray Microscopy to 15 nmJournal of Biomedical Nanotechnology, 2(2), 75-78.


Fu, A., Gu, W., Larabell, C., & Alivisatos, A. P. (2005). Semiconductor nanocrystals for biological imagingCurrent Opinion in Neurobiology, 15(5), 568-575. doi:10.1016/j.conb.2005.08.004


Larabell, C.A., & Le Gros, M.A. (2004). Whole cell cryo X-ray tomography and protein localization at 50 nanometer resolutionBiophysical Journal86, 185A-185A.

Larabell, C. A., & Le Gros, M. A. (2004). X-ray tomography generates 3-D reconstructions of the yeast, Saccharomyces cerevisiae, at 60-nm resolutionMolecular Biology of the Cell, 15(3), 957-962. doi:10.1091/mbc.E03-07-0522


Weaver, C., Farr, G. H., III, Pan, W., Rowning, B. A., Wang, J., Mao, J., Wu, D., Li, L., Larabell, C.A., & Kimelman, D. (2003). GBP binds kinesin light chain and translocates during cortical rotation in Xenopus eggsDevelopment, 130(22), 5425-5436. doi:10.1242/dev.00737

Pellegrino, T., Parak, W. J., Boudreau, R., Le gros, M. A., Gerion, D., Alivisatos, A. P., & Larabell, C. A. (2003). Quantum dot-based cell motility assayDifferentiation, 71(9), 542-548. doi:10.1111/j.1432-0436.2003.07109006.x

Parak, W. J., Gerion, D., Pellegrino, T., Zanchet, D., Micheel, C., Williams, S. C., Boudreau, R., Gros, M.A.L., Larabell, C.A., & Alivisatos, A. P. (2003). Biological applications of colloidal nanocrystalsNanotechnology, 14(7), R15-R27. doi:10.1088/0957-4484/14/7/201


Parak, W. J., Boudreau, R., Le Gros, M., Gerion, D., Zanchet, D., Micheel, C. M., Williams, S.C., Alivisatos, A.P., & Larabell, C. (2002). Cell Motility and Metastatic Potential Studies Based on Quantum Dot Imaging of Phagokinetic TracksAdvanced Materials, 14(12), 882-885. doi:10.1002/1521-4095(20020618)14:12<882::AID-ADMA882>3.0.CO;2-Y


Denbeaux, G., Anderson, E., Chao, W., Eimüller, T., Johnson, L., Köhler, M., Larabell, C.A., Le Gros, M.A., Fischer, P., Pearson, A., Schütz, G., Yager, D., & Attwood, D. (2001). Soft X-ray microscopy to 25nm with applications to biology and magnetic materialsNuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 467-468, doi:10.1016/s0168-9002(01)00480-6